From: Sensing the cilium, digital capture of ciliary data for comparative genomics investigations
Curation status | GO term category | Experimental | Unknown | Curator statement | Author statement | Sequence | Phylogenetic | Electronic | Total |
---|---|---|---|---|---|---|---|---|---|
A. Annotation counts in July 2013 | |||||||||
Completed genes (134) | Ciliary | 153 | – | 0 | 5 | 79 | 0 | 41 | 278 |
Related | 225 | – | 0 | 3 | 92 | 0 | 16 | 336 | |
Other | 316 | 87 | 0 | 18 | 328 | 0 | 598 | 1347 | |
Not yet targeted genes (176) | Ciliary | 196 | – | 3 | 0 | 74 | 1 | 18 | 292 |
Related | 705 | – | 0 | 6 | 168 | 12 | 22 | 913 | |
Other | 1867 | 91 | 2 | 56 | 1192 | 49 | 934 | 4191 | |
Total | 3462 | 178 | 5 | 88 | 1933 | 62 | 1629 | 7357 | |
B. Annotation counts in December 2016 | |||||||||
Completed genes (134) | Ciliary | 504 | – | 21 | 1 | 214 | 45 | 37 | 822 |
Related | 511 | – | 0 | 3 | 149 | 17 | 17 | 697 | |
Other | 689 | 41 | 3 | 7 | 525 | 81 | 618 | 1964 | |
Not yet targeted genes (176) | Ciliary | 317 | – | 4 | 0 | 158 | 20 | 18 | 517 |
Related | 830 | – | 0 | 6 | 214 | 29 | 25 | 1104 | |
Other | 2344 | 54 | 4 | 65 | 1712 | 216 | 905 | 5300 | |
Total | 5195 | 95 | 32 | 82 | 2972 | 408 | 1620 | 10,404 | |
C. Difference in annotation counts from 2013 to 2016 | |||||||||
Completed genes (134) | Ciliary | 351 | – | 21 | − 4 | 135 | 45 | − 4 | 544 |
Related | 286 | – | 0 | 0 | 57 | 17 | 1 | 361 | |
Other | 373 | − 46 | 3 | − 11 | 197 | 81 | 20 | 617 | |
Not yet targeted genes (176) | Ciliary | 121 | – | 1 | 0 | 84 | 19 | 0 | 225 |
Related | 125 | – | 0 | 0 | 46 | 17 | 3 | 191 | |
Other | 477 | − 37 | 2 | 9 | 520 | 167 | − 29 | 1109 | |
Total | 1733 | − 83 | 27 | − 6 | 1039 | 346 | − 9 | 3047 | |
D. Fold change in annotations from 2013 to 2016 | |||||||||
Completed genes (134) | Ciliary | 3.29 | – | DZ | 0.20 | 2.71 | DZ | 0.90 | 2.96 |
Related | 2.27 | – | DZ | 1.00 | 1.62 | DZ | 1.06 | 2.07 | |
Other | 2.18 | 0.47 | DZ | 0.39 | 1.60 | DZ | 1.03 | 1.46 | |
Not yet targeted genes (176) | Ciliary | 1.62 | – | 1.33 | DZ | 2.14 | 20.00 | 1.00 | 1.77 |
Related | 1.18 | – | DZ | 1.00 | 1.27 | 2.42 | 1.14 | 1.21 | |
Other | 1.26 | 0.59 | 2.00 | 1.16 | 1.44 | 4.41 | 0.97 | 1.26 | |
Total | 1.50 | 0.53 | 6.40 | 0.93 | 1.54 | 6.58 | 0.99 | 1.41 |