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Table 7 Increases in experimental and sequence based annotations to BBSome and IFT terms for completed genes

From: Sensing the cilium, digital capture of ciliary data for comparative genomics investigations

Gene symbol (IDs)

# annotations (July 2013)

# annotations (Dec 2016)

IDA

ISO

IDA

ISO

A. BBSome (GO:0034464)

 Bbs1

(MGI:1277215, Q3V3N7)

2

1

3

1

 Bbs2

(MGI:2135267, Q9CWF6)

2

2

4

2

 Bbs4

(MGI:2143311, Q8C1Z7)

2

1

3

1

 Bbs5

(MGI:1919819, Q9CZQ9)

2

1

4

1

 Bbs7

(MGI:1918742, Q8K2G4)

2

1

4

1

 Bbs9

(MGI:2442833, Q811G0)

1

1

3

1

 Ttc8

(MGI:1923510, Q8VD72)

2

1

4

1

 Total

 

13

8

25

8

B. intraciliary transport particle A (GO:0030991)

 Ift122

(MGI:1932386, Q6NWV3)

 

1

1

1

 Ift140

(MGI:2146906, E9PY46)

 

1

1

1

 Ift43

(MGI:1923661, Q9DA69)

 

1

1

1

 Ttc21b

(MGI:1920918, Q0HA38)

 

1

1

1

 Wdr19

(MGI:2443231, Q3UGF1)

 

1

1

2

 Wdr35

(MGI:1921932, Q8BND3)

 

1

1

1

 Total

  

6

6

7

C. intraciliary transport particle B (GO:0030992)

 Cluap1

(MGI:1924029, Q8R3P7)

  

1

 

 Hspb11

(MGI:1920188, Q9D6H2)

1

 

2

 

 Ift172

(MGI:2682064, Q6VH22)

  

3

 

 Ift20

(MGI:1915585, Q61025)

1

 

5

 

 Ift22

(MGI:1914536, Q9DAI2)

  

3

 

 Ift27

(MGI:1914292, Q9D0P8)

  

4

1

 Ift46

(MGI:1923818, Q9DB07)

  

4

 

 Ift52

(MGI:2387217, Q62559)

  

5

 

 Ift57

(MGI:1921166, Q8BXG3)

  

5

 

 Ift74

(MGI:1914944, Q8BKE9)

  

4

 

 Ift80

(MGI:1915509, Q8K057)

  

4

 

 Ift81

(MGI:1098597, O35594)

  

5

 

 Ift88

(MGI:98715, Q61371)

  

5

 

 Traf3ip1

(MGI:1921269, Q149C2)

  

3

 

 Ttc26

(MGI:2444853, Q8BS45)

  

2

 

 Ttc30a1

(MGI:1926052, Q99J38)

  

2

 

 Ttc30a2

(MGI:3700200, A2AKQ8)

  

1

 

 Ttc30b

(MGI:1919671, Q9CY00)

  

1

 

 Total

 

2

 

59

1

  1. This table shows the number of experimental and sequence orthology annotations for genes in the set of 134 completed genes made directly to the BBSome (Panel A.), intraciliary transport particle A (Panel B.), and intraciliary transport particle B (Panel C.) terms in the cellular component aspect of GO before the start of this annotation project in July 2013 (from gene_association.mgi Revision 10039—Jul 12 2013) and as of December 2016. (from gene_association.mgi Revision 37787—Dec 23 2016). Both the MGI feature ID and the UniProt IDs are given